FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005738498

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005738498
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1655369
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGCG803.891553E-545.08
TATCGGC1157.4930085E-637.5652167
TCGGCGG1051.9311927E-434.2857179
TTATCGG1850.005254330619.459466
GGCCTAT10055.1772926E-47.88059668
CGCCTGT16004.4573626E-67.20000037
CTTTACA24203.2160146E-45.05785132
Produced by FastQC (version 0.11.5)