FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005738543

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005738543
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2508061
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGCG1000.00628510828.88
TATCGGC1750.003809976920.5714287
CTCGTCG1502.1398617E-510.5615-19
CGTCGCT1451.7649225E-49.93103515-19
TCGTCGC1450.00194391348.93793115-19
CTCACGC21001.5186743E-87.23
CGCCTGT26052.9995135E-96.63339667
GCTCACG20855.1483585E-66.21582752
TCACGCC26251.6193917E-76.0342864
CCGTAAA2950.00443826765.85762735-39
ACGCCTG26256.2685904E-65.48571446
AGTACCT15800.0094830245.46835479
CACGCCT27652.685918E-65.4683545
Produced by FastQC (version 0.11.5)