FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005738690

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005738690
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1646875
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACCGCAC4350.004220969511.5862061
CCGCACC5100.001072633311.2941182
AGCGACC1550.0035571028.361291100-104
CGCCTGT16800.00304823835.57142837
Produced by FastQC (version 0.11.5)