FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005738730

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005738730
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4937032
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGCG1402.8819157E-530.8571458
TCGGCGG2500.001460613917.2799999
TATCGGC3100.00612347713.9354847
TCGTCGC2404.5474735E-1010.815-19
CGTCGCT1751.0771058E-59.87428615-19
CTCGTCG2703.5033736E-99.615-19
AAGTCGG4801.2868368E-66.0140-144
TAGTGCG3350.00294772845.5880625-29
GTTACCG3700.0094691615.059459720-24
Produced by FastQC (version 0.11.5)