FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005738759

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005738759
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7378478
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGCG3450.064.695658
TCGGCGG5850.043.0769239
TATCGGC6650.030.315797
TTATCGG7250.021.8482766
TCGTCGC3500.013.57714315-19
CCGATCG2601.4551915E-1111.07692355-59
ATTATCG13653.6379788E-1110.549455
CGATCGG2601.9319486E-89.415384130-134
CTCGTCG5050.09.40990115-19
CGTCGCT5000.08.927999515-19
TCCGGCG5350.08.88224325-29
GCGATCG3103.7192876E-88.361291130-134
GTTACCG6500.07.975384720-24
CCGGCGA5700.07.831578730-34
CAGTACC41900.07.56085878
CGGCGAG6100.07.55409830-34
CGTTACC6550.07.25496215-19
CGATCGC3902.3205212E-77.015384760-64
CCAGTAC43500.06.78620677
AGTACCT50700.06.39053259
Produced by FastQC (version 0.11.5)