FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005738838

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005738838
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2436180
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGCG1150.081.3913048
TCGGCGG1800.052.09
TATCGGC1800.052.07
TTATCGG1850.050.5945936
ATTATCG4256.730261E-1122.023535
CGATCGG757.976397E-515.360001130-134
CGATCGC708.233798E-414.40000260-64
CCGATCG600.004927300414.455-59
CCGGCGA1301.9354047E-814.430-34
TCGTCGC852.312201E-413.55294115-19
CGGCGAG1806.2937033E-1012.830-34
TCCGGCG1602.9186594E-711.70000125-29
TTACCGA2004.718495E-710.0820-24
CTCGTCG1200.00414508269.59999915-19
CGTCGCT1200.00414508269.59999915-19
TACCGAA2151.266957E-69.37674420-24
GTTACCG2005.1281477E-69.3620-24
GCGATCG1300.0080071288.861538130-134
CGTTACC2457.402823E-68.22857215-19
GGTTCGT2405.0896204E-57.799999715-19
Produced by FastQC (version 0.11.5)