FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005738918

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005738918
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2473632
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGCG851.8189894E-1276.235298
TCGGCGG1557.930794E-1041.8064549
TATCGGC2151.9390427E-830.1395367
TTATCGG2553.259629E-928.2352946
ATTATCG3855.3077165E-616.831175
TGTCGCC10155.759778E-47.80295565
CGGCGAG1700.008157437.623529430-34
CTGTCGC10407.471629E-47.61538464
TCTGTCG11653.0667498E-47.4163093
TCGTTAC2050.00545119967.0243915-19
CGTTACC2150.0086429146.697674315-19
GGTTCGT2650.00133311356.52075515-19
CCCTTAA15850.0098177485.4511041
Produced by FastQC (version 0.11.5)