FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005738984

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005738984
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6557935
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGCG1401.5057594E-841.1428578
TCGGCGG3202.0490226E-518.0000029
TATCGGC4453.411321E-412.9438217
TCGTCGC2201.4693796E-810.47272815-19
CTCGTCG3254.277718E-56.64615415-19
AAGTCGG7101.17543095E-85.4760566140-144
ACCGCGC17200.00403157855.44186071
CGTCGCT3750.00189739435.37615-19
Produced by FastQC (version 0.11.5)