FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005739073

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005739073
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4969109
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGCG1557.930794E-1041.8064548
TCGGCGG3004.876656E-721.5999989
TTATCGG3951.2416953E-414.5822786
TATCGGC4502.3287676E-514.47
TCCGGCG2958.6898915E-56.83389925-29
ACCGCGC12300.00439872836.4390251
Produced by FastQC (version 0.11.5)