FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005739137

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005739137
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6527603
Sequences flagged as poor quality0
Sequence length150
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGCG2200.042.5454568
TCGGCGG4800.022.59
TATCGGC5052.5396548E-715.6831687
TCGTCGC3052.5468944E-78.0262315-19
CCGATCG2558.6197455E-46.776470755-59
CTCGTCG3952.1279666E-66.56202515-19
CGTCGCT4701.3008139E-76.43404215-19
GCGATCG2956.424247E-46.3457627130-134
TCCGGCG4451.4768439E-55.824719425-29
CAGTACC38151.9699655E-95.4731328
Produced by FastQC (version 0.11.5)