FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005739166

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005739166
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7464049
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGCG2252.8002672E-522.4000028
TCGGCGG4450.00500380311.3258429
TATCGGC5100.001073407611.2941187
TTATCGG6204.6378E-410.4516136
CGATCGG1150.002915299710.017391130-134
TCGTCGC2752.7337472E-46.807272415-19
CTCGTCG3600.00113289425.615-19
Produced by FastQC (version 0.11.5)