FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005739609

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005739609
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5491928
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGCG1905.815309E-934.1052638
TATCGGC3551.0938311E-720.2816897
TCGGCGG3754.133024E-617.2799999
TTATCGG4001.3819564E-414.46
TCGTCGC2302.9305738E-810.01739115-19
CTCGTCG2806.4335836E-88.74285715-19
CGTCGCT3255.632155E-67.08923115-19
AAGTCGG7751.6321792E-85.2025805140-144
CCCAAGT77150.05.03953361
CCGAGTA27256.763747E-55.02018362
Produced by FastQC (version 0.11.5)