Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005740282 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 10645791 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATAGG | 3100 | 0.0 | 16.378181 | 1 |
CTACACT | 5725 | 0.0 | 14.689251 | 4 |
GTGTAGG | 7400 | 0.0 | 13.820277 | 1 |
GTATAGA | 6190 | 0.0 | 13.709593 | 1 |
TACACTG | 8400 | 0.0 | 13.291028 | 5 |
TATACTG | 7790 | 0.0 | 12.656646 | 5 |
TATACGC | 885 | 6.042683E-9 | 12.288469 | 2 |
TAGGACT | 6615 | 0.0 | 12.274544 | 4 |
TAGGGGT | 5345 | 0.0 | 12.207086 | 4 |
CCTACAC | 6950 | 0.0 | 12.100309 | 3 |
GTCATAC | 3245 | 0.0 | 12.070032 | 1 |
GTATACG | 1690 | 0.0 | 12.017127 | 1 |
TACACCG | 3765 | 0.0 | 11.938338 | 5 |
TACCGTC | 1120 | 1.200533E-10 | 11.651227 | 7 |
TCTAGAC | 4795 | 0.0 | 11.64194 | 3 |
CTACCCT | 6260 | 0.0 | 11.580914 | 4 |
GTGTAGA | 6460 | 0.0 | 11.564692 | 1 |
GCTATAC | 3325 | 0.0 | 11.555999 | 3 |
CTATACC | 3845 | 0.0 | 11.501398 | 4 |
CTAGGAC | 4225 | 0.0 | 11.496652 | 3 |