EGAF00005740390 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005740390
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10097855
Sequences flagged as poor quality	0
Sequence length	65
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	106311	1.0528077497646777	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCTGTAGCCATCTCGTATGCCGTCTTCTGCTTG	73182	0.7247281724683113	TruSeq Adapter, Index 15 (97% over 37bp)
CCCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13065	0.12938391371236763	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	8645	53.743652	48
TCGTATG	8685	53.530098	45
CTCGTAT	8850	52.398746	44
CGTATGC	8925	52.05758	46
GTATGCC	9200	50.56564	47
GCCGTCT	9675	48.32701	51
TCTCGTA	9755	47.62828	43
ACGTCTG	9970	47.10419	15
ATCTCGT	9890	46.799183	42
ACCTGTA	10030	46.49889	32
ACACGTC	10470	45.023754	13
CATCTCG	10415	44.241863	41
CACGTCT	10780	43.811104	14
CGTCTGA	10800	43.5934	16
CACACGT	10885	43.388702	12
ATGCCGT	10825	43.13846	49
TAGCCAT	10790	42.922977	37
CCTGTAG	10975	42.602623	33
CAGTCAC	11575	40.62486	27
TGCCGTC	11600	40.33266	50