FastQCFastQC Report
Tue 28 Jun 2022
EGAF00005740669

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005740669
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences140470455
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGACCACCAGGTTGCCTAAGGAGGGGTGAACCGGCCCAGGTCGGAAAC1731460.1232615071973676No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGA1659040.1181059746691929No Hit
GTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGG1615750.1150241878265433No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)