FastQCFastQC Report
Sat 2 Jul 2022
EGAF00005740932

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005740932
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences124400777
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG6028890.4846344327897566No Hit
GTCGCAGTCTCGCACCCGCGAGATACTCACAAAAACCACCGTGGACCATA4137900.3326265397843938No Hit
TACTGATCCAAAATGGAAGATTTTGTGCGACAATGCTTCAATCCGATGAT3715790.29869507969391546No Hit
GCTTCTTATCGTTCAGGCTCTTAGGGACAACCTGGAACCTGGGACCTTTG2862920.23013682623541812No Hit
GCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGG2725220.21906776353977273No Hit
GGGGAGGACCTGAAAATCGAAACAAACAAATTTGCAGCAATATGCACTCA2452300.19712899381649363No Hit
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT2272730.18269419651615199No Hit
GGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAG2268340.1823413048296314No Hit
GTCGGGATATCCAGTATGGTGGAGGCTATGGTTTCCAGAGCCCGAATTGA2261350.18177941123309865No Hit
GGGGGCTATATGAAGCAATTGAGGAGTGCCTGATTAATGATCCCTGGGTT2252610.18107684327405768No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA2100160.16882209666584316No Hit
GTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGA2087560.16780924125578411No Hit
CCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATG2065020.1659973554666785No Hit
GCAGGTACTGATCCAAAATGGAAGATTTTGTGCGACAATGCTTCAATCCG2001530.1608936895948809No Hit
CTTTGATCTTGGGGGGCTATATGAAGCAATTGAGGAGTGCCTGATTAATG1995090.16037600794085072No Hit
GGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCA1929470.15510112127354317No Hit
GGGGTTTAAAATGAATCCAAATCAGAAAATAATAACCATTGGATCAATCT1876910.15087606727729683No Hit
GCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGAT1853010.1489548574121848No Hit
GCTCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGAT1826900.14685599592356244No Hit
GCCTGATTAATGATCCCTGGGTTTTGCTTAATGCTTCTTGGTTCAACTCC1787300.14367273606337683No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT1783920.143401033580361No Hit
GGGCAAAGAAGACAAGAGATATGGGCCAGCACTAAGCATCAATGAACTGA1733780.139370512131126No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT1723690.1385594239495787No Hit
GGCGAGTCAATAATCGTAGAACTTGGTGATCCAAATGCACTTTTGAAGCA1691060.1359364499789258No Hit
CAGGTACTGATCCAAAATGGAAGATTTTGTGCGACAATGCTTCAATCCGA1631050.1311125251251445No Hit
GCTGAATCAAGAAAACTGCTTCTTATCGTTCAGGCTCTTAGGGACAACCT1560540.12544455409631405No Hit
GTCGGTATTCAACAGCTTGTATGCATCTCCACAACTAGAAGGATTTTCAG1554640.1249702805312864No Hit
GTCTGCAGGACTTTATTAGCAAAGTCGGTATTCAACAGCTTGTATGCATC1546190.12429102432374678No Hit
GGGAAGAGATCGCACAATGGCCTGGACAGTAGTAAACAGTATTTGCAACA1501860.12072754175803903No Hit
GGGAGGACCTGAAAATCGAAACAAACAAATTTGCAGCAATATGCACTCAC1484770.11935375612645892No Hit
GTGCGACAATGCTTCAATCCGATGATTGTCGAGCTTGCGGAAAAAACAAT1478310.11883446676542865No Hit
GTCGAGCTTGCGGAAAAAACAATGAAAGAGTATGGGGAGGACCTGAAAAT1449610.11652740722029413No Hit
GCGGAAAAAACAATGAAAGAGTATGGGGAGGACCTGAAAATCGAAACAAA1435280.11537548515472697No Hit
GGGCTATATGAAGCAATTGAGGAGTGCCTGATTAATGATCCCTGGGTTTT1404590.11290845876308311No Hit
GTCAATTATATTCAATATGGAAAGAATAAAAGAACTAAGAAATCTAATGT1365980.10980478039940217No Hit
CCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTG1352630.10873163597683959No Hit
GGTACTGATCCAAAATGGAAGATTTTGTGCGACAATGCTTCAATCCGATG1350100.10852826104132773No Hit
GGGTGACAAAAACATAATGGATCCAAACACTGTGTCAAGCTTTCAGGTAG1319280.10605078455418329No Hit
CTGCAGGACTTTATTAGCAAAGTCGGTATTCAACAGCTTGTATGCATCTC1291420.10381124870305271No Hit
GGAAAAAACAATGAAAGAGTATGGGGAGGACCTGAAAATCGAAACAAACA1244170.10001304091533127No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)