FastQCFastQC Report
Sat 18 Jun 2022
EGAF00005741334

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005741334
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38419926
Sequences flagged as poor quality0
Sequence length8-150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNN3508040.9130782813064241No Hit
CCCGTCGGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGAG407910.10617146946092504No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)