FastQCFastQC Report
Sat 18 Jun 2022
EGAF00005741354

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005741354
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49498275
Sequences flagged as poor quality0
Sequence length8-150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAG712660.14397673454276944No Hit
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT677430.13685931479430344No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)