FastQCFastQC Report
Sat 25 May 2024
EGAF00005741357

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005741357
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences117911325
Total Bases16.9 Gbp
Sequences flagged as poor quality0
Sequence length8-150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNN10668290.904772293925117No Hit
CCCGTCGGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGAG1215980.10312665047229347No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)