FastQCFastQC Report
Sat 18 Jun 2022
EGAF00005741387

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005741387
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45663257
Sequences flagged as poor quality0
Sequence length35-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1192950.26124943299598624No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1040220.22780241015221492No Hit
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT603350.1321303033640373No Hit
CCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAG523950.1147421437765598No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)