FastQCFastQC Report
Sun 26 Jun 2022
EGAF00005741772

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005741772
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences153135180
Sequences flagged as poor quality0
Sequence length100
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGGTGGCTCACGCCTGTAATCCCAGCTCTCAGGGAGGCTAAGAGGCGGG2210570.1443541582019233No Hit
CGGTGGCTCACGCCTGTAATCCCAGCTCTCAGGGAGGCTAAGAGGCGGGA2019340.13186649860600289No Hit
CGCGGTGGCTCACGCCTGTAATCCCAGCTCTCAGGGAGGCTAAGAGGCGG1669680.10903307783358468No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)