FastQCFastQC Report
Tue 12 Jul 2022
EGAF00005741781

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005741781
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences142814013
Sequences flagged as poor quality0
Sequence length100
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT53288773.7313404252564486No Hit
TTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT3871150.2710623361588474No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1931710.13526053637327592No Hit
TTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1571550.11004172258642433No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)