FastQCFastQC Report
Mon 4 Jul 2022
EGAF00005742085

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005742085
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences113991135
Sequences flagged as poor quality0
Sequence length100
%GC49

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAA1694400.14864313790717146No Hit
GTGGCCTTGGTATGTGCTTTCTCGTGTTACATCGCGCCATCATTGGTATA1533840.13455783206299332No Hit
GTGGTGGCCTTGGTATGTGCTTTCTCGTGTTACATCGCGCCATCATTGGT1368860.12008477676794778No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)