FastQCFastQC Report
Fri 24 Jun 2022
EGAF00005742087

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005742087
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences86476663
Sequences flagged as poor quality0
Sequence length100
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGTTGTTGCTTTGAGGGAAGTTACGCTTATTTTTTTTTTGTCTTTTG1143710.13225649097953746No Hit
GTGGCCTTGGTATGTGCTTTCTCGTGTTACATCGCGCCATCATTGGTATA943700.1091277076683683No Hit
GTTGCTTTGAGGGAAGTTACGCTTATTTTTTTTTTGTCTTTTGTTTTTTT918200.10617893523481589No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)