FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005743564

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005743564
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19869115
Sequences flagged as poor quality0
Sequence length100
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGCG7650.00264301436.76008279
CGCCGTA11400.06.596223446-47
GTCGCCG13300.06.537369744-45
ATCGGAA51200.05.04777894
Produced by FastQC (version 0.11.5)