FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005743613

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005743613
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25424551
Sequences flagged as poor quality0
Sequence length100
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC25700.014.8105746
TTCCGAT33550.011.3452085
CCGATCT36250.011.0187147
CGATCTA15153.6379788E-128.064568
CTTCCGA64700.06.6093254
TCTTCCG80550.05.65882353
GATCGGA25603.929017E-95.323410594
Produced by FastQC (version 0.11.5)