FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005743617

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005743617
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25124891
Sequences flagged as poor quality0
Sequence length100
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC24950.015.0678226
CCGATCT35050.011.5303247
TTCCGAT33550.011.3454985
CTTCCGA63200.06.69200854
TCTTCCG78250.05.64513833
CGATCTA14605.818166E-45.1498938
Produced by FastQC (version 0.11.5)