FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005743619

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005743619
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25097237
Sequences flagged as poor quality0
Sequence length100
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC22700.012.0065836
TTCCGAT30950.08.9601285
CCGATCT32850.08.2967867
CGATCTA12903.8127837E-87.285478
TAGATCG12604.355909E-45.61095694
Produced by FastQC (version 0.11.5)