FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005743695

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005743695
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39413014
Sequences flagged as poor quality0
Sequence length100
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC33400.011.8174036
TTCCGAT45400.08.9065175
CCGATCT48450.08.4375177
CGATCTA20550.07.3169048
CTTCCGA88350.05.48145684
Produced by FastQC (version 0.11.5)