FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005744122

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005744122
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences139829986
Sequences flagged as poor quality0
Sequence length76
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA420800.09.15280970
AGATCGG520500.08.6037470
ATCGGAA385200.07.771722370
TAGATCG172650.07.726732370
Produced by FastQC (version 0.11.5)