FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005744145

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005744145
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences162173816
Sequences flagged as poor quality0
Sequence length76
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC150100.010.8635726
GATCGGA418950.09.753221570
AGATCGG540500.09.40121670
TTCCGAT183300.09.3158655
ATCGGAA388750.09.05055170
TAGATCG174450.08.57765670
CCGATCT218400.07.97891867
TCGTATG91350.05.975752445
TCGGAAG603350.05.14026770
CGTATGC114600.05.129952446
Produced by FastQC (version 0.11.5)