FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005744231

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005744231
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences114666987
Sequences flagged as poor quality0
Sequence length76
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA293200.09.39445570
AGATCGG365600.08.55969570
TCCGATC91200.08.4409286
ATCGGAA278700.08.14870
TCGTATG70350.08.10774845
TAGATCG130700.08.07056470
CGTATGC77950.07.137884646
TTCCGAT120650.06.6705545
TATGCCG85050.06.62430748
CTCGTAT89050.06.60156144
CCGATCT136300.06.0586927
Produced by FastQC (version 0.11.5)