FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005744233

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005744233
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences133841904
Sequences flagged as poor quality0
Sequence length76
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA467300.010.34886870
AGATCGG592100.010.09110870
ATCGGAA426850.09.69581170
TCGTATG79150.09.59371345
CGTATGC87700.09.097527546
TAGATCG205600.08.675693570
TATGCCG98850.08.14210548
CTCGTAT104200.07.589507644
TCGGAAG556200.06.09263370
AAGATCG364550.05.911906270
TCTCGTA146500.05.75636843
CAGATCG344800.05.600075770
CGGAAGA588550.05.01346870
Produced by FastQC (version 0.11.5)