FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005744234

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005744234
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences133841904
Sequences flagged as poor quality0
Sequence length76
%GC51

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG629900.09.60028570
GATCGGA509050.09.49940970
TAGATCG204750.09.44014370
GCCGTAT85200.09.2807159
CGTATCA85050.09.25594561
ATCGGAA462600.09.06049470
CGCCGTA86250.09.00545158
TAGCGTT95150.08.2005532
GTAGCGT112550.07.27463131
CCGTATC134450.06.089280660
TCGTGTA149300.05.483873414
TCGGAAG637650.05.409003370
Produced by FastQC (version 0.11.5)