FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005744266

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005744266
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences171421049
Sequences flagged as poor quality0
Sequence length76
%GC53

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG625400.07.670429770
GATCGGA501200.07.4543670
ATCGGAA457050.07.15550370
TAGATCG186700.07.14558370
CGTATCA98400.05.262356361
Produced by FastQC (version 0.11.5)