FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005744271

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005744271
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences160701363
Sequences flagged as poor quality0
Sequence length76
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG605750.09.43562870
GATCGGA481200.09.11777870
ATCGGAA434600.08.748836570
TAGATCG194900.08.36086870
TCGTATG97950.08.07383145
CGTATGC121750.06.89810946
CTCGTAT127700.06.466856544
TATCTCG130250.06.420890341
TATGCCG141200.05.92313748
TCCGATC133300.05.17130376
AAGATCG386200.05.09957970
TCGGAAG662750.05.03910570
Produced by FastQC (version 0.11.5)