FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005744272

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005744272
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences160701363
Sequences flagged as poor quality0
Sequence length76
%GC53

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTATCA93750.08.62088461
AGATCGG679200.08.326014570
GATCGGA549600.08.09131970
TAGATCG209000.08.04187470
GCCGTAT103100.07.737246559
ATCGGAA500850.07.683380670
CGCCGTA117500.06.72947258
CCGTATC160550.05.556977760
Produced by FastQC (version 0.11.5)