FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005744273

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005744273
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences149692181
Sequences flagged as poor quality0
Sequence length76
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA402200.010.13333470
AGATCGG510900.09.26689370
TAGATCG167550.08.8891370
ATCGGAA372750.08.69638570
TCCGATC123050.06.6542736
TCGTATG83600.05.566995645
TTCCGAT152550.05.52803045
Produced by FastQC (version 0.11.5)