FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005744274

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005744274
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences149692181
Sequences flagged as poor quality0
Sequence length76
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA440100.09.26098370
AGATCGG557150.08.72314170
TAGATCG182650.08.41589670
ATCGGAA404700.08.06377270
CGCCGTA87300.05.77117858
CGTATCA90350.05.769942861
GCCGTAT93350.05.73446159
Produced by FastQC (version 0.11.5)