FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005744301

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005744301
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences86598365
Sequences flagged as poor quality0
Sequence length25-101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA1879000.09.657433594-95
GATCGGA2065000.09.49886494-95
ACACGTC582800.09.34142594-95
AGATCGG2354300.09.32180494-95
TCGGAAG1805250.09.14596994-95
CGTCTGA404650.09.10670494-95
TAGATCG708150.08.81225994-95
CGGAAGA1721050.08.6314194-95
CACACGT728650.08.422317594-95
ACGTCTG509950.08.30849994-95
GCACACG856400.08.05876194-95
CAGATCG900800.08.03808494-95
CACGTCT604650.07.929479694-95
AAGATCG772250.07.90958594-95
AGAGCAC1449350.07.276577594-95
GAGATCG777050.06.802765494-95
AGCACAC1237900.06.650283394-95
GAGCACA1450800.06.34008694-95
AAGAGCA1875650.06.320036494-95
GAAGAGC2058050.06.30042294-95
Produced by FastQC (version 0.11.5)