FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005744314

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005744314
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences154580648
Sequences flagged as poor quality0
Sequence length76
%GC52

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA474850.07.949447670
AGATCGG590450.07.857916470
ATCGGAA436000.07.43702370
TAGATCG185100.06.8103770
GCCGTAT91000.06.382356659
CGTATCA91450.05.5474861
CGCCGTA100350.05.508772458
Produced by FastQC (version 0.11.5)