FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005744428

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005744428
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences134475861
Sequences flagged as poor quality0
Sequence length76
%GC52

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTATCA82100.09.58848161
GATCGGA485250.09.34478970
GCCGTAT91950.09.17010959
AGATCGG607650.08.96646670
CGCCGTA95600.08.34423658
ATCGGAA431050.08.22899970
TAGATCG181550.08.15848370
CCGTATC141150.05.87453560
TCGTGTA155850.05.477904314
Produced by FastQC (version 0.11.5)