EGAF00005745474 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005745474
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	610067
Sequences flagged as poor quality	0
Sequence length	2-144
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACAGTAACAAACCCTGCTTCTTTATATTCAGGAGATGTTCTGGACTCACA	4416	0.7238549208529556	No Hit
ACAGTAACAAACCCTGCTTCTTTATATTCAGGAGATGTTCTGGACTCATA	3820	0.6261607331653737	No Hit
TGACAAAGGTTAGTTGAATGAATGATCACTGTAGAGCACCTCCCTATTTT	1504	0.24653029913107904	No Hit
TGATAAAGGTTAGTTGAATGAATGATCACTGTAGAGCACCTCCCTATTTT	1451	0.23784272874946522	No Hit
ACAATAACAAACCCTGCTTCTTTATATTCAGGAGATGTTCTGGACTCACA	1305	0.21391093109445355	No Hit
TGACAAAGGTCAGTTGAATGAATGATCACTGTAGAGCACCTCCCTATTTT	1201	0.1968636231758151	No Hit
ACAATAACAAACCCTGCTTCTTTATATTCAGGAGATGTTCTGGACTCATA	1134	0.18588122288207687	No Hit
TGATAAAGGTCAGTTGAATGAATGATCACTGTAGAGCACCTCCCTATTTT	846	0.13867329326123198	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GAGCTTT	550	246.65775	138
ACAGTAA	1085	118.05509	1
CAGTAAC	1115	115.47704	2
GTAACAA	1170	110.61884	4
AGTAACA	1195	108.86291	3
ACAAACC	1515	107.44604	7
CAAACCC	1575	103.35286	8
AAACCCT	1695	96.03584	9
GTTAGTT	475	95.50554	9
CAATAAC	345	94.7524	2
TAACAAA	1760	92.48907	5
AGGTTAG	485	92.16081	7
AAGGTTA	490	91.2204	6
CAAAGGT	445	89.95068	4
GCCGCCT	905	89.9415	138
GACGCAA	75	88.95123	8
AACAAAC	1890	86.12738	6
AAAGGTT	530	84.33584	5
ACGCAAG	80	83.39178	9
TAAAGGT	330	82.886375	4