EGAF00005745475 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005745475
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	610067
Sequences flagged as poor quality	0
Sequence length	2-144
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACAGTAACAAACCCTGCTTCTTTATATTCAGGAGATGTTCTGGACTCACA	4961	0.8131893710035127	No Hit
ACAGTAACAAACCCTGCTTCTTTATATTCAGGAGATGTTCTGGACTCATA	4401	0.7213961745185365	No Hit
TGACAAAGGTTAGTTGAATGAATGATCACTGTAGAGCACCTCCCTATTTT	1779	0.29160731526209416	No Hit
ACAATAACAAACCCTGCTTCTTTATATTCAGGAGATGTTCTGGACTCACA	1706	0.27964141643458834	No Hit
TGATAAAGGTTAGTTGAATGAATGATCACTGTAGAGCACCTCCCTATTTT	1619	0.2653806876949581	No Hit
ACAATAACAAACCCTGCTTCTTTATATTCAGGAGATGTTCTGGACTCATA	1399	0.22931907479014602	No Hit
TGACAAAGGTCAGTTGAATGAATGATCACTGTAGAGCACCTCCCTATTTT	1380	0.22620466276654858	No Hit
TGATAAAGGTCAGTTGAATGAATGATCACTGTAGAGCACCTCCCTATTTT	1004	0.16457208798377884	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GAGCTTT	650	315.67584	138
CAGTAAC	1360	119.19343	2
ACAGTAA	1410	114.4936	1
ACAAACC	1925	112.279175	7
GTAACAA	1460	111.486404	4
AGTAACA	1460	111.486404	3
CAAACCC	1930	111.29701	8
CAATAAC	480	109.79203	2
AAACCCT	2030	105.8144	9
TAACAAA	2170	100.21733	5
AACAAAC	2210	98.10159	6
ACAATAA	580	92.01253	1
AAAGGTC	350	91.48674	5
ATAACAA	610	86.39373	4
GGAGCTT	975	85.38342	136-137
TAAAGGT	430	85.32557	4
GTTAGTT	545	84.45737	9
AATAACA	635	82.9924	3
AGGTTAG	555	81.73364	7
GATAAAG	465	78.90322	2