FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005751252

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005751252
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14188524
Sequences flagged as poor quality0
Sequence length100
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCGGAT46200.07.245840594
TAAGTCG21350.06.84598994
ATCGTAG35500.06.507889394
GATCGTA31200.05.96673992-93
AGTCGGA62700.05.86542594
AAGTCGG68200.05.530673594
CGGATCG39250.05.46344192-93
GGATCGT49250.05.265369494
TCGGATC48350.05.168348394
Produced by FastQC (version 0.11.5)