FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005751253

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005751253
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23130928
Sequences flagged as poor quality0
Sequence length100
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACGATC15700.010.38672924-25
CGATCCG18600.07.865466626-27
GAACGAC37050.06.999604712-13
ACGACAT39750.06.51481914-15
TAAGTCG34800.06.04891394
GCTACGA32300.05.635773722-23
AAGTCGG108500.05.47542894
ATCCGAC21450.05.160915428-29
AGTCGGA100050.05.096282594
Produced by FastQC (version 0.11.5)