FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005751260

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005751260
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7871647
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCGGAT32450.07.266021394
TCGTAGC25750.06.959013594
TAAGTCG13651.00644684E-76.909373894
GATCGTA22550.06.900947694
CGGATCG27300.06.736639594
TCGGATC32300.05.985806594
AAGACCG14653.6379788E-125.616954336-37
AAGTCGG41500.05.567873594
AGTCGGA39900.05.55180992-93
CGTAGCC25600.05.43114792-93
ATCGTAG23800.05.34454190-91
CGGTAAC5950.0080424795.130862784-85
Produced by FastQC (version 0.11.5)