FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005751264

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005751264
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13886893
Sequences flagged as poor quality0
Sequence length100
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGATCG38550.08.80705194
TAAGTCG21700.06.953646794
GATCGTA29050.06.655184394
GTCGGAT44950.06.60896194
TCGGATC46200.06.325296492-93
TCGTAGC35600.05.82807494
AGTCGGA61850.05.794236794
ATCGTAG34200.05.78834492-93
CGTAGCC38500.05.389075894
GGATCGT45200.05.320520494
AAGTCGG63750.05.249395492-93
Produced by FastQC (version 0.11.5)