FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005751342

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005751342
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19014432
Sequences flagged as poor quality0
Sequence length100
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGGATC32400.06.376497794
CGGATCG22900.06.151206594
TAAGTCG17853.6659003E-75.78707494
GTCGGAT31150.05.727961594
AAGTCGG47900.05.29337794
GGATCGT31353.274181E-115.24209794
AGTCGGA43500.05.07321494
GATCGTA18602.6637452E-55.0488494
Produced by FastQC (version 0.11.5)