FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005751358

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005751358
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19350573
Sequences flagged as poor quality0
Sequence length100
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGTA23250.07.072815494
CGGATCG24500.06.32841794
AGTCGGA48350.06.316319594
GTCGGAT33600.06.012795494
AAGTCGG50000.05.35343792-93
CGTAGCC32307.6397555E-115.09111394
Produced by FastQC (version 0.11.5)